C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449549 B3GNT9-001 ENSG00000237172 9606 - 16:67148105-67151214 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000449549
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000449549 4.570±0.00 0.891±0.00 14.407±0.00 3.639±2.25 2.759±2.43 3.028±2.50 0.920±0.00 4.362±1.61 4.683±3.87 1.392±0.31 12.024±10.84 10.289±2.23 10.042±5.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0001 VISTA 16:66603173-67205657
CIL_0005T2 CIL_0005T2_0001 CGP 16:67029116-67148539
CIL_0003M3 CIL_0003M3_0002 CGP 16:67109958-67151214
CIL_0005T5 CIL_0005T5_0001 CGP 16:67148105-67160298

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008378 IEA galactosyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093217 B3gnt9-201 protein_coding Mus_musculus 0 390
ENSMUST00000136822 B3gnt9-001 protein_coding Mus_musculus 0 390
ENSMUST00000124113 D230025D16Rik-004 nonsense_mediated_decay Mus_musculus 0 390
ENSMUST00000034361 D230025D16Rik-001 protein_coding Mus_musculus 0 390
ENSMUST00000141957 D230025D16Rik-003 nonsense_mediated_decay Mus_musculus 0 202
ENSMUST00000161745 B3gnt9-002 protein_coding Mus_musculus 0.00000000001 77

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