C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: voltage-dependent anion channel 1 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450197 VDAC1P4-001 ENSG00000235060 9606 + 1:180434800-180435936 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungMuscleOvaryTestisENST00000450197
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000450197 0.034±0.00 0.074±0.00 0.155±0.14 0.016±0.00 0.036±0.00 0.030±0.00 0.467±0.00 0.164±0.00 0.179±0.21 0.016±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020673 Vdac1-005 protein_coding Mus_musculus 0 852
ENSMUST00000102758 Vdac1-001 protein_coding Mus_musculus 0 852
ENSMUST00000125694 Vdac1-003 nonsense_mediated_decay Mus_musculus 0 682
ENSMUST00000160955 Gm16102-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000121607 Gm13360-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000117896 Gm7910-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000153339 Vdac1-004 retained_intron Mus_musculus 4.00001e-41 172
ENSMUST00000121449 Gm15502-001 processed_pseudogene Mus_musculus 3e-32 143

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