C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450845 SPATA24-002 ENSG00000170469 9606 - 5:139396767-139404068 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLungMuscleOvaryPlacentaTestisENST00000450845
Transcript ID Adipose Adrenal Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000450845 0.665±0.00 0.530±0.00 0.085±0.00 0.439±0.00 0.845±0.42 1.767±0.00 1.514±0.00 0.739±0.35 0.830±0.11 7.543±2.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000545 CIL_000545_0001 CGP 5:139390592-139404088
CIL_000546 CIL_000546_0001 CGP 5:139396563-139444491

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation
GO:0042803 IEA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025209 Spata24-201 protein_coding Mus_musculus 0 850
ENSMUST00000096573 Spata24-202 protein_coding Mus_musculus 0 545

Loading