C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096573 Spata24-202 ENSMUSG00000024352 10090 - 18:35660017-35662186 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000096573
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000096573 1.080±0.25 3.088±0.71 3.496±0.43 1.304±0.00 1.003±0.46 0.547±0.22 0.706±0.07 1.673±0.47 2.750±2.64 2.209±0.86 5.225±3.13 1.042±0.66 377.983±35.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000545 CIL_000545_0002 CGP 18:35650351-35662186
CIL_000546 CIL_000546_0002 CGP 18:35656690-35703144

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008150 ND biological_process
GO:0030154 IEA cell differentiation
GO:0042803 IDA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302091 SPATA24-001 protein_coding Homo_sapiens 0 564
ENST00000450845 SPATA24-002 protein_coding Homo_sapiens 0 545
ENST00000451821 SPATA24-003 protein_coding Homo_sapiens 0 695
ENST00000507779 SPATA24-006 protein_coding Homo_sapiens 0 597
ENST00000509959 SPATA24-004 protein_coding Homo_sapiens 0 492
ENST00000512761 SPATA24-005 protein_coding Homo_sapiens 0 281
ENST00000514983 SPATA24-007 protein_coding Homo_sapiens 0 523

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