C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451821 SPATA24-003 ENSG00000170469 9606 - 5:139401501-139404067 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000451821
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000451821 1.287±0.00 1.414±0.90 0.532±0.00 0.681±0.00 2.582±1.44 0.690±0.35 1.535±0.00 4.336±0.00 2.157±0.73 1.101±0.20 14.908±9.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000545 CIL_000545_0001 CGP 5:139390592-139404088
CIL_000546 CIL_000546_0001 CGP 5:139396563-139444491

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096573 Spata24-202 protein_coding Mus_musculus 0 695
ENSMUST00000025209 Spata24-201 protein_coding Mus_musculus 0 545

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