C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, BED-type containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452236 ZBED9-001 ENSG00000232040 9606 - 6:28571630-28587335 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000452236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000452236 0.027±0.00 0.029±0.00 0.089±0.00 0.627±0.06 0.098±0.00 0.073±0.00 0.189±0.00 0.673±0.00 0.163±0.00 0.292±0.19 0.186±0.01 2.018±0.86

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0015074 IEA DNA integration
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 0 215
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 0 215
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 2e-35 156
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 2e-35 156
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 2e-35 156
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 2e-35 156
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 1e-33 150
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 1e-28 134
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 1e-28 134
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 1e-28 134
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 5e-27 128

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