C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: catenin (cadherin-associated protein), beta 1, 88kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453024 CTNNB1-005 ENSG00000168036 9606 + 3:41199445-41239736 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000453024
Transcript ID Testis
ENST00000453024 6.201±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000481 CIL_000481_0001 CGP 3:41194837-41962430

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005886 IDA plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178812 Ctnnb1-201 protein_coding Mus_musculus 0 3096
ENSMUST00000007130 Ctnnb1-001 protein_coding Mus_musculus 0 3096
ENSMUST00000154356 Ctnnb1-002 nonsense_mediated_decay Mus_musculus 0 3090
ENSMUST00000163844 Ctnnb1-011 nonsense_mediated_decay Mus_musculus 0 2676
ENSMUST00000154687 Ctnnb1-003 retained_intron Mus_musculus 0 2134
ENSMUST00000156911 Ctnnb1-010 processed_transcript Mus_musculus 0 1024
ENSMUST00000133689 Ctnnb1-009 protein_coding Mus_musculus 0 684
ENSMUST00000126633 Ctnnb1-007 processed_transcript Mus_musculus 0 640
ENSMUST00000169931 Ctnnb1-005 protein_coding Mus_musculus 0 634
ENSMUST00000170729 Ctnnb1-013 nonsense_mediated_decay Mus_musculus 0 566
ENSMUST00000139138 Ctnnb1-008 retained_intron Mus_musculus 0 453

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