C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAD50 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453394 RAD50-003 ENSG00000113522 9606 + 5:132557231-132595768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverENST00000453394
Transcript ID Heart Liver
ENST00000453394 0.637±0.00 1.848±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093D CIL_00093D_0001 VISTA 5:131965137-132566411
CIL_0007RF CIL_0007RF_0001 VISTA 5:131967147-132570227

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000723 IEA telomere maintenance
GO:0004518 IEA nuclease activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0008270 IEA zinc ion binding
GO:0016887 IEA ATPase activity
GO:0030870 IEA Mre11 complex
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124352 Rad50-005 protein_coding Mus_musculus 0 2338
ENSMUST00000128483 Rad50-002 nonsense_mediated_decay Mus_musculus 0 1666
ENSMUST00000020649 Rad50-001 protein_coding Mus_musculus 0 1666
ENSMUST00000152598 Rad50-003 processed_transcript Mus_musculus 0 407

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