C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 1 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453661 HDAC1P2-001 ENSG00000233012 9606 + 1:220625740-220627448 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartMuscleOvaryPlacentaTestisENST00000453661
Transcript ID Adipose Bladder Brain Breast Colon Heart Muscle Ovary Placenta Testis
ENST00000453661 0.152±0.00 0.241±0.00 0.225±0.17 0.020±0.00 0.118±0.00 0.366±0.00 0.374±0.00 0.104±0.10 0.072±0.00 0.200±0.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102597 Hdac1-001 protein_coding Mus_musculus 0 721
ENSMUST00000079363 Gm10093-201 protein_coding Mus_musculus 0 717
ENSMUST00000139305 Hdac1-002 retained_intron Mus_musculus 0 270
ENSMUST00000145628 Hdac1-007 retained_intron Mus_musculus 0 241
ENSMUST00000121066 Gm14524-001 processed_pseudogene Mus_musculus 2e-35 154

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