Transcript Info |
||||||
Description: | LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000455705 | LSM2-001 | ENSG00000236826 | 9606 | - | CHR_HSCHR6_MHC_COX_CTG1:31784754-31794345 | protein_coding |
Expression PatternsNo expression data. |
Conserved Regions |
---|
Gene is not located within a conserved region. |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000288 | TAS | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
GO:0000398 | IC | mRNA splicing, via spliceosome |
GO:0005515 | IPI | protein binding |
GO:0005654 | TAS | nucleoplasm |
GO:0005829 | TAS | cytosol |
GO:0006397 | IEA | mRNA processing |
GO:0008380 | TAS | RNA splicing |
GO:0010467 | TAS | gene expression |
GO:0016070 | TAS | RNA metabolic process |
GO:0016071 | TAS | mRNA metabolic process |
GO:0017070 | NAS | U6 snRNA binding |
GO:0043928 | TAS | exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay |
GO:0044822 | IDA | poly(A) RNA binding |
GO:0071013 | IDA | catalytic step 2 spliceosome |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000114011 | Lsm2-001 | protein_coding | Mus_musculus | 0 | 499 |
ENSMUST00000007266 | Lsm2-003 | protein_coding | Mus_musculus | 0 | 446 |
ENSMUST00000174326 | Lsm2-008 | processed_transcript | Mus_musculus | 0 | 436 |
ENSMUST00000172777 | Lsm2-004 | processed_transcript | Mus_musculus | 0 | 435 |
ENSMUST00000172890 | Lsm2-007 | processed_transcript | Mus_musculus | 0 | 416 |
ENSMUST00000173004 | Lsm2-011 | protein_coding | Mus_musculus | 0 | 351 |
ENSMUST00000172666 | Lsm2-010 | retained_intron | Mus_musculus | 0 | 350 |
ENSMUST00000174860 | Lsm2-005 | retained_intron | Mus_musculus | 0 | 344 |
ENSMUST00000174241 | Lsm2-009 | processed_transcript | Mus_musculus | 0 | 339 |
ENSMUST00000174434 | Lsm2-006 | retained_intron | Mus_musculus | 0 | 248 |