C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oligosaccharyltransferase 4 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456793 OST4-001 ENSG00000228474 9606 - 2:27070472-27071773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000456793
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000456793 65.056±0.00 116.605±0.00 13.862±0.00 34.196±13.15 50.233±23.55 104.016±69.21 83.792±72.03 84.828±53.62 86.058±58.92 120.579±106.13 70.608±44.76 130.989±91.10 205.057±86.07 130.176±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004K CIL_00004K_0001 CGP 2:27032910-27070622
CIL_00004D CIL_00004D_0001 CGP 2:27042364-27071773
CIL_00004E CIL_00004E_0001 CGP 2:27070472-27086408

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132253 Ost4-001 protein_coding Mus_musculus 0 617
ENSMUST00000132034 Ost4-002 protein_coding Mus_musculus 0 580
ENSMUST00000031057 Agbl5-003 protein_coding Mus_musculus 0 357
ENSMUST00000134956 Agbl5-005 retained_intron Mus_musculus 0 196
ENSMUST00000114700 Agbl5-004 protein_coding Mus_musculus 0 195
ENSMUST00000136715 Agbl5-002 nonsense_mediated_decay Mus_musculus 0 195
ENSMUST00000114704 Agbl5-001 protein_coding Mus_musculus 0 195
ENSMUST00000190667 RP24-179O1.1-001 processed_pseudogene Mus_musculus 1e-39 167

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