C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oligosaccharyltransferase 4 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132253 Ost4-001 ENSMUSG00000038803 10090 - 5:30905885-30907788 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000132253
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000132253 95.326±4.31 82.282±3.83 69.479±0.00 43.468±13.13 64.253±20.33 107.102±6.18 54.157±15.47 133.030±5.81 95.215±11.68 118.607±12.57 10.335±1.71 77.062±27.81 56.879±47.96 168.791±64.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0002 VISTA 5:30314016-30916922
CIL_00004K CIL_00004K_0002 CGP 5:30869579-30906965
CIL_00004D CIL_00004D_0002 CGP 5:30888694-30907788
CIL_00004E CIL_00004E_0002 CGP 5:30905885-30921278

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360131 AGBL5-004 protein_coding Homo_sapiens 0 501
ENST00000429985 OST4-003 protein_coding Homo_sapiens 0 580
ENST00000447619 OST4-002 protein_coding Homo_sapiens 0 496
ENST00000456793 OST4-001 protein_coding Homo_sapiens 0 617
ENST00000487078 AGBL5-001 nonsense_mediated_decay Homo_sapiens 0 505

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