C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: death effector domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458050 DEDD-201 ENSG00000158796 9606 - 1:161120977-161132466 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverENST00000458050
Transcript ID Colon Liver
ENST00000458050 1.756±0.00 3.486±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CT CIL_0000CT_0002 CGP 1:161100556-161125445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 ISS DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0042981 IEA regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111300 Dedd-001 protein_coding Mus_musculus 0 2182
ENSMUST00000111299 Dedd-003 protein_coding Mus_musculus 0 2170
ENSMUST00000064950 Dedd-002 protein_coding Mus_musculus 0 1964
ENSMUST00000097467 Dedd-004 protein_coding Mus_musculus 0 1869
ENSMUST00000111289 Nit1-001 protein_coding Mus_musculus 0 1245
ENSMUST00000129116 Dedd-007 protein_coding Mus_musculus 0 1088
ENSMUST00000142063 Dedd-006 protein_coding Mus_musculus 0 985
ENSMUST00000127830 Dedd-010 protein_coding Mus_musculus 0 749
ENSMUST00000131653 Dedd-005 retained_intron Mus_musculus 0 693
ENSMUST00000141357 Nit1-005 retained_intron Mus_musculus 0 547
ENSMUST00000146428 Nit1-004 retained_intron Mus_musculus 0 508
ENSMUST00000111296 Nit1-003 protein_coding Mus_musculus 0 508
ENSDART00000128377 dedd-201 protein_coding Danio_rerio 5.04467e-44 183
ENSDART00000042867 dedd-001 protein_coding Danio_rerio 5.04467e-44 183
ENSMUST00000111295 Nit1-002 protein_coding Mus_musculus 4e-25 121

Loading