C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: death effector domain containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000158796 DEDD 9606 - 1:161120974-161132688 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368005 DEDD-002 161122025-161130837 protein_coding
  ENST00000368006 DEDD-001 161120974-161132668 protein_coding
  ENST00000458050 DEDD-201 161120977-161132466 protein_coding
  ENST00000463227 DEDD-008 161122333-161132476 processed_transcript
  ENST00000464113 DEDD-010 161122242-161132588 protein_coding
  ENST00000472996 DEDD-007 161120974-161131097 processed_transcript
  ENST00000473679 DEDD-003 161122263-161132450 processed_transcript
  ENST00000486041 DEDD-005 161121930-161130847 processed_transcript
  ENST00000489249 DEDD-009 161121744-161132572 processed_transcript
  ENST00000490843 DEDD-006 161121787-161132667 protein_coding
  ENST00000496632 DEDD-004 161122351-161132151 processed_transcript
  ENST00000545495 DEDD-202 161120977-161132688 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368005ENST00000368006ENST00000458050ENST00000463227ENST00000464113ENST00000486041ENST00000490843
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368005 N/A N/A 1.259±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000368006 16.580±0.00 14.210±0.00 0.716±0.00 1.719±0.00 7.990±0.00 13.458±0.00 3.948±3.01 10.624±0.00 7.020±0.00 7.995±6.62 16.281±0.00 14.822±0.50 15.420±0.22 22.916±3.36
ENST00000458050 N/A N/A N/A N/A N/A 1.756±0.00 N/A N/A 3.486±0.00 N/A N/A N/A N/A N/A
ENST00000463227 N/A N/A N/A N/A N/A 2.609±0.00 N/A N/A N/A 2.744±0.00 N/A N/A N/A N/A
ENST00000464113 N/A N/A N/A N/A 3.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.042±0.00 N/A N/A N/A
ENST00000490843 N/A N/A N/A N/A 9.974±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CT CIL_0000CT_0002 CGP 1:161100556-161125445

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 ISS DNA binding
GO:0005515 IEA protein binding
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007283 IEA spermatogenesis
GO:0008625 IEA extrinsic apoptotic signaling pathway via death domain receptors
GO:0042177 IEA negative regulation of protein catabolic process
GO:0042981 IEA regulation of apoptotic process
GO:0046697 IEA decidualization
GO:1901837 IEA negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029783 dedd death effector domain containing protein_coding Danio_rerio
ENSMUSG00000013973 Dedd death effector domain-containing protein_coding Mus_musculus

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