C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458455 RPL11-005 ENSG00000142676 9606 + 1:23692609-23696128 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungMuscleOvaryENST00000458455
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary
ENST00000458455 16.942±0.00 12.723±0.00 20.774±0.00 34.675±0.00 12.887±0.00 35.977±0.00 43.443±0.00 15.128±0.00 61.352±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155873 Rpl11-002 protein_coding Mus_musculus 0 693
ENSMUST00000125726 Rpl11-003 processed_transcript Mus_musculus 0 693
ENSMUST00000102536 Rpl11-001 protein_coding Mus_musculus 0 693
ENSMUST00000084614 Gm10288-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000079733 Gm10036-201 protein_coding Mus_musculus 0 688
ENSMUST00000085631 Gm7589-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000166852 Gm5093-201 protein_coding Mus_musculus 0 599
ENSMUST00000147059 Rpl11-004 processed_transcript Mus_musculus 0 577
ENSMUST00000118690 Gm12901-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000142440 Rpl11-007 processed_transcript Mus_musculus 0 497
ENSDART00000063870 rpl11-201 protein_coding Danio_rerio 0 472
ENSMUST00000128733 Rpl11-005 processed_transcript Mus_musculus 0 388
ENSMUST00000150565 Rpl11-006 processed_transcript Mus_musculus 0 339
ENSMUST00000137580 Rpl11-009 processed_transcript Mus_musculus 0 285
ENSMUST00000133613 Rpl11-008 processed_transcript Mus_musculus 0 191
ENSDART00000075902 CABZ01086825.1-201 protein_coding Danio_rerio 2e-19 100

Loading