C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | spermidine synthase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000459997  |
SRM-005 |
ENSG00000116649 |
9606 | - |
1:11056011-11060020  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008RU | CIL_0008RU_0001 | VISTA | 1:10491513-11092116 |
| CIL_0008JG | CIL_0008JG_0001 | VISTA | 1:10565145-11165671 |
| CIL_0008JY | CIL_0008JY_0001 | VISTA | 1:10605072-11206087 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003824 | IEA | catalytic activity |
| GO:0008152 | IEA | metabolic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000152701
|
Srm-002 | retained_intron | Mus_musculus | 0 | 593 |
|
ENSMUST00000006611
|
Srm-001 | protein_coding | Mus_musculus | 0 | 569 |
