C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460006 CDS2-004 ENSG00000101290 9606 + 20:5126786-5197887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000460006
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000460006 13.693±0.00 7.901±0.00 2.938±0.00 16.608±4.82 5.477±3.28 5.633±1.68 9.607±4.76 5.598±3.21 4.509±1.97 4.541±0.82 2.195±0.66 3.788±1.60 1.868±0.82 8.357±1.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G1 CIL_0004G1_0001 CGP 20:5114953-5197887
CIL_0003N7 CIL_0003N7_0001 CGP 20:5126786-5314369

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004605 NAS:IEA phosphatidate cytidylyltransferase activity
GO:0005743 TAS mitochondrial inner membrane
GO:0005783 IEA endoplasmic reticulum
GO:0006644 TAS phospholipid metabolic process
GO:0006655 TAS phosphatidylglycerol biosynthetic process
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016024 IEA CDP-diacylglycerol biosynthetic process
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103181 Cds2-001 protein_coding Mus_musculus 0 1735
ENSMUST00000089461 Cds2-002 protein_coding Mus_musculus 0 1707
ENSMUST00000138194 Cds2-006 protein_coding Mus_musculus 0 523
ENSMUST00000110158 Cds2-003 protein_coding Mus_musculus 0 433
ENSMUST00000147456 Cds2-004 nonsense_mediated_decay Mus_musculus 0 339
ENSMUST00000125060 Cds2-005 protein_coding Mus_musculus 0 329

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