C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004G1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132646-ENSG00000101290 CGP 9606 20:5114953-5197887
GeneTranscriptPositionBiotype
ENSG00000101290 (CDS2)
CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
ENST00000379070 (CDS2-007) 5176102-5191354 processed_transcript
ENST00000450570 (CDS2-002) 5126927-5186774 protein_coding
ENST00000460006 (CDS2-004) 5126786-5197887 protein_coding
ENST00000467923 (CDS2-001) 5126879-5183178 processed_transcript
ENST00000468817 (CDS2-005) 5127009-5187879 processed_transcript
ENST00000486875 (CDS2-003) 5127048-5175652 processed_transcript
ENSG00000132646 (PCNA)
proliferating cell nuclear antigen
ENST00000379143 (PCNA-001) 5114953-5120026 protein_coding
ENST00000379160 (PCNA-002) 5114953-5126626 protein_coding
ENSG00000212517 (SNORA26)
Small nucleolar RNA SNORA26
ENST00000391215 (SNORA26.1-205) 5121417-5121539 snoRNA
CIL_0004G1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027342-ENSMUSG00000058793 CGP 10090 2:132249162-132312050
GeneTranscriptPositionBiotype
ENSMUSG00000027342 (Pcna)
proliferating cell nuclear antigen
ENSMUST00000028817 (Pcna-001) 132249162-132253314 protein_coding
ENSMUST00000135181 (Pcna-004) 132251329-132252967 retained_intron
ENSMUST00000136676 (Pcna-002) 132249877-132252596 processed_transcript
ENSMUST00000140338 (Pcna-005) 132249162-132250170 retained_intron
ENSMUST00000149627 (Pcna-003) 132251429-132252602 retained_intron
ENSMUSG00000058793 (Cds2)
CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
ENSMUST00000089461 (Cds2-002) 132285939-132312050 protein_coding
ENSMUST00000103181 (Cds2-001) 132263148-132312050 protein_coding
ENSMUST00000110158 (Cds2-003) 132263148-132296193 protein_coding
ENSMUST00000125060 (Cds2-005) 132285176-132295573 protein_coding
ENSMUST00000138194 (Cds2-006) 132301296-132305328 protein_coding
ENSMUST00000147456 (Cds2-004) 132263241-132297271 nonsense_mediated_decay
ENSMUSG00000087377 (AV099323)
expressed sequence AV099323
ENSMUST00000124336 (AV099323-001) 132253357-132261333 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004G1_0001ENSG00000101290ENST00000379070ENST00000450570ENST00000460006ENST00000467923ENST00000468817ENST00000486875ENSG00000132646ENST00000379143ENST00000379160ENSG00000212517ENST00000391215CIL_0004G1_0002ENSMUSG00000027342ENSMUST00000028817ENSMUST00000135181ENSMUST00000136676ENSMUST00000140338ENSMUST00000149627ENSMUSG00000058793ENSMUST00000089461ENSMUST00000103181ENSMUST00000110158ENSMUST00000125060ENSMUST00000138194ENSMUST00000147456ENSMUSG00000087377ENSMUST00000124336
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004G1_0001ENSG00000101290ENST00000379070ENST00000450570ENST00000460006ENSG00000132646ENST00000379143ENST00000379160ENSG00000212517ENST00000391215CIL_0004G1_0002ENSMUSG00000027342ENSMUST00000028817ENSMUST00000136676ENSMUSG00000058793ENSMUST00000089461ENSMUST00000103181ENSMUST00000110158ENSMUST00000147456ENSMUSG00000087377ENSMUST00000124336
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101290 ENST00000379070 N/A N/A N/A N/A 3.063±0.00 N/A N/A 4.708±0.00 3.394±0.00 3.030±0.27 0.844±0.00 4.081±0.36 4.764±0.78 3.659±0.00
ENST00000450570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.365±0.51 N/A
ENST00000460006 13.693±0.00 7.901±0.00 2.938±0.00 16.608±4.82 5.477±3.28 5.633±1.68 9.607±4.76 5.598±3.21 4.509±1.97 4.541±0.82 2.195±0.66 3.788±1.60 1.868±0.82 8.357±1.75
ENST00000467923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000132646 ENST00000379143 9.777±0.00 20.969±0.00 N/A 7.845±2.07 11.019±0.55 12.652±1.59 7.406±0.00 15.497±9.25 6.043±0.73 5.552±0.00 4.111±1.05 47.770±43.79 40.108±4.92 45.300±9.44
ENST00000379160 1.602±0.00 N/A 2.753±0.00 N/A 2.077±0.00 1.584±0.00 2.210±0.47 N/A N/A 4.693±1.77 2.537±0.00 13.783±11.04 N/A 6.402±0.00
ENSG00000212517 ENST00000391215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.492±0.00 N/A 3.244±2.41
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027342 ENSMUST00000028817 22.840±13.60 52.942±15.12 33.336±6.97 49.909±38.29 32.716±15.72 52.564±5.60 12.115±2.03 21.214±1.72 157.466±170.59 42.407±3.91 6.971±0.72 49.795±18.83 45.468±38.33 42.156±19.72
ENSMUST00000135181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136676 N/A N/A N/A 22.079±0.00 N/A N/A N/A N/A N/A N/A N/A 62.036±0.00 68.547±47.32 81.900±0.00
ENSMUST00000140338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000058793 ENSMUST00000089461 6.372±1.28 7.504±1.87 8.077±1.20 8.466±2.66 10.903±6.06 3.201±0.00 13.119±2.16 4.395±1.46 5.447±2.41 14.609±6.35 3.275±0.63 10.442±6.11 6.134±4.48 2.169±0.13
ENSMUST00000103181 15.081±1.16 16.980±2.65 11.567±0.57 14.061±5.85 14.708±6.22 16.703±2.32 9.623±1.63 14.731±2.41 8.147±4.50 27.756±8.66 2.641±0.64 15.705±3.53 6.409±1.80 1.693±0.84
ENSMUST00000110158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.733±0.00 N/A N/A
ENSMUST00000125060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147456 N/A 41.738±4.98 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087377 ENSMUST00000124336 0.108±0.01 0.191±0.00 0.232±0.00 0.177±0.03 0.135±0.05 N/A 0.091±0.03 0.222±0.04 1.129±0.36 0.303±0.12 0.125±0.07 0.402±0.12 0.249±0.12 0.704±0.13

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