C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S20 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461659 RPS20P4-001 ENSG00000241907 9606 - 5:150021567-150021921 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryTestisENST00000461659
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000461659 0.210±0.00 0.554±0.00 1.175±0.85 0.734±0.66 1.272±1.03 1.385±0.00 0.396±0.36 0.654±0.00 0.032±0.00 0.442±0.32 0.147±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0001 VISTA 5:150006686-150608670

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103009 Rps20-002 retained_intron Mus_musculus 0 348
ENSMUST00000138502 Rps20-001 protein_coding Mus_musculus 0 346
ENSMUST00000130128 Rps20-003 retained_intron Mus_musculus 0 267
ENSMUST00000154056 Gm4997-001 processed_pseudogene Mus_musculus 0 252

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