C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit A, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462047 PPP2R1A-010 ENSG00000105568 9606 + 19:52212492-52215841 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000462047
Transcript ID Ovary Testis
ENST00000462047 28.628±0.00 20.039±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173359 Ppp2r1a-006 retained_intron Mus_musculus 0 545
ENSMUST00000173658 Ppp2r1a-007 nonsense_mediated_decay Mus_musculus 0 534
ENSMUST00000007708 Ppp2r1a-001 protein_coding Mus_musculus 0 534
ENSMUST00000147983 Ppp2r1a-002 protein_coding Mus_musculus 0 305

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