C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | post-GPI attachment to proteins 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000464906  |
PGAP2-039 |
ENSG00000148985 |
9606 | + |
11:3797926-3825680  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005K0 | CIL_0005K0_0001 | CGP | 11:3665587-3797792 |
| CIL_0005K9 | CIL_0005K9_0001 | CGP | 11:3671083-3826371 |
| CIL_0005KW | CIL_0005KW_0001 | CGP | 11:3797724-3840983 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000139 | ISS | Golgi membrane |
| GO:0005789 | ISS | endoplasmic reticulum membrane |
| GO:0006506 | ISS | GPI anchor biosynthetic process |
| GO:0008565 | ISS | protein transporter activity |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000120119
|
Pgap2-007 | protein_coding | Mus_musculus | 0 | 1038 |
|
ENSMUST00000033292
|
Pgap2-003 | protein_coding | Mus_musculus | 0 | 863 |
|
ENSMUST00000119816
|
Pgap2-024 | nonsense_mediated_decay | Mus_musculus | 0 | 833 |
|
ENSMUST00000145352
|
Pgap2-023 | nonsense_mediated_decay | Mus_musculus | 0 | 832 |
|
ENSMUST00000120879
|
Pgap2-029 | protein_coding | Mus_musculus | 0 | 785 |
|
ENSMUST00000156529
|
Pgap2-002 | protein_coding | Mus_musculus | 0 | 785 |
|
ENSMUST00000150891
|
Pgap2-005 | processed_transcript | Mus_musculus | 0 | 769 |
|
ENSMUST00000134621
|
Pgap2-025 | retained_intron | Mus_musculus | 0 | 756 |
|
ENSMUST00000137303
|
Pgap2-027 | protein_coding | Mus_musculus | 0 | 750 |
|
ENSMUST00000153020
|
Pgap2-013 | protein_coding | Mus_musculus | 0 | 651 |
|
ENSMUST00000138479
|
Pgap2-014 | protein_coding | Mus_musculus | 0 | 647 |
|
ENSMUST00000133311
|
Pgap2-028 | processed_transcript | Mus_musculus | 0 | 560 |
|
ENSMUST00000129340
|
Pgap2-006 | nonsense_mediated_decay | Mus_musculus | 0 | 558 |
|
ENSMUST00000140058
|
Pgap2-022 | nonsense_mediated_decay | Mus_musculus | 0 | 481 |
|
ENSMUST00000142873
|
Pgap2-021 | protein_coding | Mus_musculus | 0 | 246 |
|
ENSMUST00000140631
|
Pgap2-030 | protein_coding | Mus_musculus | 5e-37 | 159 |
