C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal recognition particle receptor, B subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000466490 SRPRB-001 ENSG00000144867 9606 + 3:133784033-133821492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalHeartLungMuscleOvaryPlacentaTestisENST00000466490
Transcript ID Adipose Adrenal Heart Lung Muscle Ovary Placenta Testis
ENST00000466490 6.183±0.00 10.538±0.00 3.839±0.00 3.552±0.00 2.323±0.00 6.153±0.14 9.263±0.00 14.613±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005737 IDA:IEA cytoplasm
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005881 IDA cytoplasmic microtubule
GO:0006412 TAS translation
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0007264 IEA small GTPase mediated signal transduction
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035157 Srprb-001 protein_coding Mus_musculus 0 841
ENSMUST00000166836 Gm20425-001 protein_coding Mus_musculus 0 839
ENSMUST00000163567 Srprb-002 retained_intron Mus_musculus 0 569

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