C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: karyopherin alpha 1 (importin alpha 5)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470904 KPNA1-005 ENSG00000114030 9606 - 3:122425680-122459885 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000470904
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000470904 9.747±0.00 5.203±0.00 2.106±0.00 4.373±1.64 5.971±1.73 4.749±0.00 4.365±2.53 6.426±1.12 5.215±2.50 5.283±2.87 12.917±7.77 4.753±1.30 6.704±0.44 4.656±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172534 Kpna1-004 nonsense_mediated_decay Mus_musculus 0 3415
ENSMUST00000004054 Kpna1-001 protein_coding Mus_musculus 0 2820
ENSMUST00000173696 Kpna1-003 nonsense_mediated_decay Mus_musculus 0 1943
ENSMUST00000173641 Kpna1-009 protein_coding Mus_musculus 0 529
ENSMUST00000173469 Kpna1-008 retained_intron Mus_musculus 0 492
ENSMUST00000174737 Kpna1-007 nonsense_mediated_decay Mus_musculus 0 366
ENSMUST00000174500 Kpna1-006 nonsense_mediated_decay Mus_musculus 0 263

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