C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | poly(rC) binding protein 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000471308  |
PCBP4-005 |
ENSG00000090097 |
9606 | - |
3:51957459-51967448  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00087C | CIL_00087C_0001 | VISTA | 3:51705330-52307529 |
| CIL_0008NT | CIL_0008NT_0001 | VISTA | 3:51738719-52342071 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003723 | IEA | RNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000024260
|
Pcbp4-001 | protein_coding | Mus_musculus | 0 | 1273 |
|
ENSMUST00000188396
|
Pcbp4-016 | protein_coding | Mus_musculus | 0 | 900 |
|
ENSMUST00000185779
|
Pcbp4-005 | protein_coding | Mus_musculus | 0 | 547 |
|
ENSMUST00000185874
|
Pcbp4-003 | protein_coding | Mus_musculus | 0 | 503 |
|
ENSMUST00000190430
|
Pcbp4-008 | protein_coding | Mus_musculus | 0 | 479 |
|
ENSMUST00000190428
|
Pcbp4-013 | protein_coding | Mus_musculus | 0 | 427 |
|
ENSMUST00000185507
|
Pcbp4-010 | nonsense_mediated_decay | Mus_musculus | 0 | 346 |
|
ENSMUST00000188448
|
Pcbp4-012 | retained_intron | Mus_musculus | 0 | 333 |
|
ENSMUST00000186519
|
Pcbp4-014 | retained_intron | Mus_musculus | 0 | 231 |
|
ENSMUST00000185996
|
Pcbp4-009 | processed_transcript | Mus_musculus | 2e-37 | 161 |
|
ENSMUST00000187975
|
Pcbp4-006 | processed_transcript | Mus_musculus | 2e-37 | 161 |
|
ENSMUST00000185854
|
Pcbp4-004 | processed_transcript | Mus_musculus | 3e-21 | 108 |
|
ENSMUST00000164834
|
Gpr62-001 | protein_coding | Mus_musculus | 0.00000000000001 | 86 |
