C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472297 RP11-255H23.2-001 ENSG00000233836 9606 + 19:23790772-23833314 transcribed_unprocessed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyMuscleOvaryPlacentaTestisENST00000472297
Transcript ID Brain Breast Colon Kidney Muscle Ovary Placenta Testis
ENST00000472297 0.737±0.00 2.495±0.00 1.290±1.12 0.847±0.00 0.075±0.00 0.219±0.06 0.274±0.19 0.266±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000012725 Zfp273-002 protein_coding Mus_musculus 0 339
ENSMUST00000181391 Zfp273-001 protein_coding Mus_musculus 0 339
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 0 337
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 0 313
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 0 268
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 0 268
ENSMUST00000190566 Zfp708-002 protein_coding Mus_musculus 0 255
ENSMUST00000109742 Zfp708-001 protein_coding Mus_musculus 0 255
ENSMUST00000109743 RSLCAN18-202 protein_coding Mus_musculus 0 255
ENSMUST00000186303 RSLCAN18-001 nonsense_mediated_decay Mus_musculus 0 255
ENSMUST00000185856 RSLCAN18-004 processed_transcript Mus_musculus 0 255
ENSMUST00000091520 Zfp85-201 protein_coding Mus_musculus 0 215
ENSMUST00000144183 Zfp85-001 protein_coding Mus_musculus 0 215
ENSMUST00000012314 A530054K11Rik-001 protein_coding Mus_musculus 0 193
ENSMUST00000137496 Zfp738-001 protein_coding Mus_musculus 2.8026e-45 187
ENSMUST00000012873 AA987161-001 protein_coding Mus_musculus 3e-40 171
ENSMUST00000039577 Zfp51-201 protein_coding Mus_musculus 7e-37 159
ENSMUST00000162659 Zfp677-001 protein_coding Mus_musculus 9e-36 156
ENSMUST00000056107 Zfp677-002 protein_coding Mus_musculus 9e-36 156
ENSMUST00000075255 Zfp874a-001 protein_coding Mus_musculus 6e-33 147
ENSMUST00000180580 Zfp874a-002 nonsense_mediated_decay Mus_musculus 6e-33 147
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 1e-29 135
ENSMUST00000057070 Zfp456-001 protein_coding Mus_musculus 4e-24 117
ENSMUST00000021997 Rsl1-001 protein_coding Mus_musculus 6e-23 113
ENSMUST00000112544 Gm15446-001 protein_coding Mus_musculus 4e-19 100
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 2e-17 95
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 2e-17 95
ENSMUST00000099449 Zfp808-001 protein_coding Mus_musculus 2e-17 95
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 7e-17 94
ENSMUST00000185656 Zfp287-201 protein_coding Mus_musculus 3e-16 92
ENSMUST00000005399 Zfp287-001 protein_coding Mus_musculus 3e-16 92
ENSMUST00000149228 Zfp287-002 nonsense_mediated_decay Mus_musculus 3e-16 92
ENSMUST00000180507 Zfp493-003 retained_intron Mus_musculus 0.000000000000001 90
ENSMUST00000164936 Zfp493-001 protein_coding Mus_musculus 0.000000000000001 90
ENSMUST00000109732 Zfp429-001 protein_coding Mus_musculus 0.00000000000001 86
ENSMUST00000181071 Zfp429-002 protein_coding Mus_musculus 0.00000000000001 86
ENSMUST00000098509 AW146154-001 protein_coding Mus_musculus 0.00000000000001 86
ENSMUST00000107989 Gm3604-201 protein_coding Mus_musculus 0.000000000007 77
ENSMUST00000187656 Gm3604-001 protein_coding Mus_musculus 0.000000000007 77
ENSMUST00000082203 Zfp934-201 protein_coding Mus_musculus 0.000000000007 77
ENSMUST00000101547 Zfp934-202 protein_coding Mus_musculus 0.000000000007 77
ENSMUST00000171257 Gm9894-201 protein_coding Mus_musculus 0.00000000003 75
ENSMUST00000076664 Zfp53-201 protein_coding Mus_musculus 0.0000000003 71
ENSMUST00000076195 Zfp935-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000071804 AI987944-001 protein_coding Mus_musculus 0.0000002 62
ENSMUST00000056470 Zfp459-001 protein_coding Mus_musculus 0.0000007 60

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