C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centromere protein O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473706 CENPO-002 ENSG00000138092 9606 + 2:24793145-24822376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverTestisENST00000473706
Transcript ID Breast Colon Kidney Liver Testis
ENST00000473706 2.769±0.00 0.509±0.00 3.407±0.00 0.857±0.00 7.043±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000025 CIL_000025_0002 CGP 2:24491914-24793382

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000776 IEA kinetochore
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006334 TAS nucleosome assembly
GO:0034080 TAS CENP-A containing nucleosome assembly
GO:0034508 IEA centromere complex assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020984 Adcy3-201 protein_coding Mus_musculus 0 243
ENSMUST00000152792 Adcy3-004 retained_intron Mus_musculus 0 243
ENSMUST00000127756 Adcy3-003 protein_coding Mus_musculus 0 243
ENSMUST00000152065 Adcy3-002 protein_coding Mus_musculus 0 243
ENSMUST00000124505 Adcy3-001 protein_coding Mus_musculus 0 243
ENSMUST00000140975 Cenpo-001 protein_coding Mus_musculus 0 239
ENSMUST00000179139 Ptrhd1-201 protein_coding Mus_musculus 0 209

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