C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000025_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018257-ENSDARG00000016122 CGP 7955 20:36706659-36824610
GeneTranscriptPositionBiotype
ENSDARG00000016122 (ptrhd1)
peptidyl-tRNA hydrolase domain containing 1 		ENSDART00000015190 (ptrhd1-001) 36822220-36824610 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_000025_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000084676-ENSG00000184924 CGP 9606 2:24491914-24793382
GeneTranscriptPositionBiotype
ENSG00000084676 (NCOA1)
nuclear receptor coactivator 1 		ENST00000288599 (NCOA1-201) 24584477-24770702 protein_coding
ENST00000348332 (NCOA1-202) 24584477-24770702 protein_coding
ENST00000395856 (NCOA1-003) 24584541-24770702 protein_coding
ENST00000405141 (NCOA1-002) 24492058-24770702 protein_coding
ENST00000406961 (NCOA1-001) 24491932-24770702 protein_coding
ENST00000407230 (NCOA1-009) 24564310-24768543 protein_coding
ENST00000469850 (NCOA1-004) 24492023-24584484 processed_transcript
ENST00000483904 (NCOA1-008) 24584476-24659129 retained_intron
ENST00000486198 (NCOA1-010) 24707727-24711483 retained_intron
ENST00000493773 (NCOA1-011) 24767771-24768388 retained_intron
ENST00000496333 (NCOA1-007) 24491914-24644055 processed_transcript
ENSG00000138092 (CENPO)
centromere protein O 		ENST00000260662 (CENPO-201) 24793462-24822373 protein_coding
ENST00000380834 (CENPO-001) 24793145-24822376 protein_coding
ENST00000395845 (CENPO-005) 24815700-24819891 processed_transcript
ENST00000464156 (CENPO-004) 24815625-24819650 processed_transcript
ENST00000473476 (CENPO-008) 24793136-24799794 processed_transcript
ENST00000473706 (CENPO-002) 24793145-24822376 protein_coding
ENST00000486527 (CENPO-007) 24793445-24814782 retained_intron
ENST00000491031 (CENPO-006) 24793400-24816571 retained_intron
ENST00000498362 (CENPO-003) 24793478-24817787 processed_transcript
ENSG00000184924 (PTRHD1)
peptidyl-tRNA hydrolase domain containing 1 		ENST00000328379 (PTRHD1-001) 24789734-24793382 protein_coding
ENST00000467797 (PTRHD1-006) 24790263-24791606 retained_intron
ENST00000474668 (PTRHD1-003) 24790266-24793074 processed_transcript
ENST00000480190 (PTRHD1-002) 24790205-24793053 processed_transcript
ENST00000487316 (PTRHD1-004) 24790275-24793090 processed_transcript
ENST00000492046 (PTRHD1-005) 24792434-24793075 processed_transcript

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000025_0001ENSDARG00000016122ENSDART00000015190CIL_000025_0002ENSG00000084676ENST00000288599ENST00000348332ENST00000395856ENST00000405141ENST00000406961ENST00000407230ENST00000469850ENST00000483904ENST00000486198ENST00000493773ENST00000496333ENSG00000138092ENST00000260662ENST00000380834ENST00000395845ENST00000464156ENST00000473476ENST00000473706ENST00000486527ENST00000491031ENST00000498362ENSG00000184924ENST00000328379ENST00000467797ENST00000474668ENST00000480190ENST00000487316ENST00000492046
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000025_0001ENSDARG00000016122ENSDART00000015190CIL_000025_0002ENSG00000084676ENST00000288599ENST00000348332ENST00000395856ENST00000406961ENST00000407230ENSG00000138092ENST00000260662ENST00000473706ENSG00000184924ENST00000328379ENST00000467797ENST00000474668ENST00000480190
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016122 ENSDART00000015190 N/A N/A N/A 2.327±0.80 N/A N/A 4.899±2.70 2.886±0.26 1.998±0.00 N/A 8.882±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000084676 ENST00000288599 2.894±0.00 3.472±0.00 N/A 5.889±1.95 3.784±0.00 N/A 2.272±0.00 4.209±0.00 2.369±1.03 2.656±0.81 7.977±0.00 3.085±1.97 3.154±0.62 5.057±0.00
ENST00000348332 N/A N/A N/A N/A N/A 1.485±0.00 0.511±0.00 N/A N/A N/A 1.810±0.00 0.928±0.00 2.231±0.00 2.020±0.00
ENST00000395856 1.833±0.00 3.811±0.00 2.114±0.00 4.599±0.00 1.333±0.00 2.737±0.00 3.046±0.00 N/A 1.204±0.00 3.459±0.00 N/A 1.263±0.66 N/A 5.038±0.11
ENST00000405141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406961 N/A N/A N/A 2.780±0.00 N/A 2.194±0.00 N/A 2.207±0.00 N/A N/A N/A 5.955±0.00 2.036±0.00 2.003±0.00
ENST00000407230 N/A N/A 4.200±0.00 N/A N/A 2.277±0.00 2.590±0.05 N/A 3.562±0.00 N/A 2.912±0.00 0.803±0.00 N/A N/A
ENST00000469850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138092 ENST00000260662 N/A N/A N/A N/A 1.176±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473706 N/A N/A N/A N/A 2.769±0.00 0.509±0.00 N/A 3.407±0.00 0.857±0.00 N/A N/A N/A N/A 7.043±0.89
ENST00000486527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184924 ENST00000328379 N/A N/A N/A N/A N/A N/A N/A N/A 1.815±0.00 N/A 2.183±0.91 N/A N/A N/A
ENST00000467797 N/A N/A N/A N/A N/A N/A 23.088±0.00 4.939±0.00 16.866±0.00 N/A 14.205±0.00 N/A N/A N/A
ENST00000474668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.096±0.00
ENST00000480190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.359±0.00
ENST00000487316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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