C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing TCP1, subunit 4 (delta) pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475327 CCT4P1-001 ENSG00000242703 9606 - 7:140997952-140999800 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartMuscleTestisENST00000475327
Transcript ID Adrenal Heart Muscle Testis
ENST00000475327 0.007±0.00 0.006±0.00 0.006±0.00 0.104±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000605 CIL_000605_0002 CGP 7:140719327-141015228

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173867 Cct4-001 protein_coding Mus_musculus 0 1027
ENSMUST00000174244 Cct4-003 retained_intron Mus_musculus 0 641
ENSMUST00000174047 Cct4-008 nonsense_mediated_decay Mus_musculus 0 191
ENSMUST00000173853 Cct4-005 nonsense_mediated_decay Mus_musculus 6.00036e-42 176
ENSMUST00000117570 Gm15495-001 processed_pseudogene Mus_musculus 3e-20 104

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