C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cilia and flagella associated protein 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475340 CFAP46-009 ENSG00000171811 9606 - 10:132937115-132942543 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartKidneyLiverOvaryPlacentaENST00000475340
Transcript ID Adrenal Brain Heart Kidney Liver Ovary Placenta
ENST00000475340 0.071±0.00 0.407±0.00 0.075±0.00 0.579±0.16 0.059±0.00 0.074±0.00 0.090±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W3 CIL_0008W3_0001 VISTA 10:132328525-132933308
CIL_0000BC CIL_0000BC_0001 CGP 10:132808392-133131675

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000138129 9330101J02Rik-002 retained_intron Mus_musculus 0 608
ENSMUST00000140820 9330101J02Rik-003 nonsense_mediated_decay Mus_musculus 0 608
ENSMUST00000129990 9330101J02Rik-001 protein_coding Mus_musculus 0 608
ENSMUST00000130453 9330101J02Rik-006 protein_coding Mus_musculus 0 455
ENSMUST00000156116 9330101J02Rik-004 retained_intron Mus_musculus 0 455

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