C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475723 TTC19-002 ENSG00000011295 9606 + 17:15999802-16028786 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000475723
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000475723 7.450±0.00 5.041±0.00 4.049±0.00 21.395±0.00 9.643±0.00 3.369±0.00 7.300±0.00 17.934±0.00 4.053±0.00 5.032±1.78 7.165±0.00 6.280±1.34 9.720±3.67 7.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XH CIL_0002XH_0001 CGP 17:15944917-15999717
CIL_0000H6 CIL_0000H6_0001 CGP 17:15976560-16045015
CIL_0000NU CIL_0000NU_0001 CGP 17:15999380-16218185

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050646 Ttc19-003 protein_coding Mus_musculus 0 1011
ENSMUST00000101075 Ttc19-004 protein_coding Mus_musculus 0 830
ENSMUST00000162385 Ttc19-005 protein_coding Mus_musculus 0 763
ENSMUST00000154976 Ttc19-002 processed_transcript Mus_musculus 0 401

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