C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gasdermin B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477054 GSDMB-016 ENSG00000073605 9606 - 17:39904596-39919854 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000477054
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000477054 0.766±0.00 2.278±0.00 0.300±0.00 0.825±0.00 0.947±0.65 0.745±0.00 1.184±0.45 0.780±0.00 1.584±0.07 0.146±0.00 1.374±0.09 0.177±0.05 0.835±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080Z CIL_00080Z_0001 VISTA 17:39318232-39918735
CIL_00098W CIL_00098W_0001 VISTA 17:39359510-39962707
CIL_0007WH CIL_0007WH_0001 VISTA 17:39374871-39978277
CIL_00098Y CIL_00098Y_0001 VISTA 17:39768583-40372873

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00002 57

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