C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477717 ST6GALNAC5-003 ENSG00000117069 9606 + 1:76867441-77065711 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartLiverLungOvaryPlacentaTestisENST00000477717
Transcript ID Adrenal Brain Colon Heart Liver Lung Ovary Placenta Testis
ENST00000477717 0.092±0.00 1.650±0.37 0.335±0.00 0.093±0.00 0.004±0.00 0.568±0.10 0.307±0.17 0.083±0.02 0.357±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001665 ISS alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity
GO:0006486 IEA protein glycosylation
GO:0006688 ISS glycosphingolipid biosynthetic process
GO:0008373 ISS:IEA sialyltransferase activity
GO:0009312 ISS oligosaccharide biosynthetic process
GO:0030173 IEA integral component of Golgi membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044278 St6galnac5-001 protein_coding Mus_musculus 0 1458
ENSDART00000057299 st6galnac5a-201 protein_coding Danio_rerio 0 403
ENSDART00000133092 st6galnac5a-001 protein_coding Danio_rerio 0 403
ENSMUST00000161757 St6galnac5-002 processed_transcript Mus_musculus 0 302

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