C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-azacytidine induced 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479665 AZI2-001 ENSG00000163512 9606 - 3:28321047-28349127 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000479665
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000479665 2.323±0.00 3.033±0.00 0.637±0.00 2.761±1.11 3.296±0.00 1.910±0.63 1.304±0.00 4.036±0.00 1.223±0.00 1.961±0.70 0.998±0.71 1.682±0.77 0.980±0.00 1.945±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DZ CIL_0002DZ_0002 CGP 3:27715949-28325142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 IEA mitotic cell cycle
GO:0001816 IEA cytokine production
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0007249 IEA I-kappaB kinase/NF-kappaB signaling
GO:0032607 IEA interferon-alpha production
GO:0032609 IEA interferon-gamma production
GO:0032635 IEA interleukin-6 production
GO:0032640 IEA tumor necrosis factor production
GO:0042110 IEA T cell activation
GO:0044565 IEA dendritic cell proliferation
GO:0097028 IEA dendritic cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134433 Azi2-003 protein_coding Mus_musculus 0 778
ENSMUST00000044454 Azi2-001 protein_coding Mus_musculus 0 778
ENSMUST00000143024 Azi2-005 retained_intron Mus_musculus 0 606
ENSMUST00000133580 Azi2-002 protein_coding Mus_musculus 0 593
ENSMUST00000154583 Azi2-004 nonsense_mediated_decay Mus_musculus 0 472
ENSMUST00000123690 Azi2-010 protein_coding Mus_musculus 0 422
ENSMUST00000130735 Azi2-009 protein_coding Mus_musculus 0 422

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