C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002DZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019428-ENSDARG00000042996 CGP 7955 16:58696016-58776475
GeneTranscriptPositionBiotype
ENSDARG00000019428 (eomesb)
eomesodermin homolog b
ENSDART00000008317 (eomesb-201) 58696016-58708344 protein_coding
ENSDARG00000042996 (cmc1)
COX assembly mitochondrial protein 1 homolog (S. cerevisiae)
ENSDART00000063129 (cmc1-201) 58759537-58776475 protein_coding
ENSDARG00000042997 (azi2)
5-azacytidine induced 2
ENSDART00000063131 (azi2-201) 58607354-58758637 protein_coding
CIL_0002DZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163508-ENSG00000187118 CGP 9606 3:27715949-28325142
GeneTranscriptPositionBiotype
ENSG00000163508 (EOMES)
eomesodermin
ENST00000295743 (EOMES-001) 27715949-27722498 protein_coding
ENST00000449599 (EOMES-002) 27716377-27722312 protein_coding
ENST00000461503 (EOMES-004) 27718864-27722711 processed_transcript
ENSG00000163512 (AZI2)
5-azacytidine induced 2
ENST00000295748 (AZI2-003) 28322353-28348790 processed_transcript
ENST00000334100 (AZI2-014) 28331689-28348629 protein_coding
ENST00000414162 (AZI2-011) 28332369-28348924 protein_coding
ENST00000415852 (AZI2-013) 28338546-28348477 protein_coding
ENST00000420543 (AZI2-005) 28331691-28349050 protein_coding
ENST00000429369 (AZI2-002) 28315003-28332407 protein_coding
ENST00000457172 (AZI2-009) 28331826-28348819 protein_coding
ENST00000462936 (AZI2-012) 28336828-28338617 retained_intron
ENST00000463512 (AZI2-004) 28326490-28348972 retained_intron
ENST00000470234 (AZI2-010) 28331691-28332437 retained_intron
ENST00000476174 (AZI2-006) 28324187-28327002 retained_intron
ENST00000479665 (AZI2-001) 28321047-28349127 protein_coding
ENST00000488978 (AZI2-007) 28331690-28337122 retained_intron
ENST00000492044 (AZI2-008) 28324306-28336953 retained_intron
ENSG00000187118 (CMC1)
C-x(9)-C motif containing 1
ENST00000334841 (CMC1-005) 28241624-28319773 nonsense_mediated_decay
ENST00000396610 (CMC1-006) 28263112-28319741 retained_intron
ENST00000418849 (CMC1-009) 28253728-28319773 protein_coding
ENST00000423894 (CMC1-004) 28241618-28319771 protein_coding
ENST00000466830 (CMC1-002) 28241595-28325142 protein_coding
ENST00000467644 (CMC1-010) 28297101-28319773 processed_transcript
ENST00000468330 (CMC1-007) 28291801-28316407 processed_transcript
ENST00000469102 (CMC1-003) 28315901-28319773 processed_transcript
ENST00000477739 (CMC1-001) 28241584-28319762 retained_intron
ENST00000482499 (CMC1-011) 28316353-28319776 processed_transcript
ENST00000495428 (CMC1-008) 28291848-28319770 processed_transcript
ENSG00000225548 (AC098973.2)
ENST00000414382 (AC098973.2-002) 27821488-27891301 lincRNA
ENST00000425195 (AC098973.2-001) 27802762-27860325 lincRNA
ENST00000455984 (AC098973.2-003) 27821598-27860192 lincRNA
ENSG00000229243 (AC098973.1)
ENST00000432163 (AC098973.1-001) 27830888-27834136 lincRNA
ENSG00000235493 (AC092415.1)
ENST00000356047 (AC092415.1-002) 27997210-28028604 lincRNA
ENST00000437506 (AC092415.1-001) 27997544-28028603 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DZ_0001ENSDARG00000019428ENSDART00000008317ENSDARG00000042996ENSDART00000063129ENSDARG00000042997ENSDART00000063131CIL_0002DZ_0002ENSG00000163508ENST00000295743ENST00000449599ENST00000461503ENSG00000163512ENST00000295748ENST00000334100ENST00000414162ENST00000415852ENST00000420543ENST00000429369ENST00000457172ENST00000462936ENST00000463512ENST00000470234ENST00000476174ENST00000479665ENST00000488978ENST00000492044ENSG00000187118ENST00000334841ENST00000396610ENST00000418849ENST00000423894ENST00000466830ENST00000467644ENST00000468330ENST00000469102ENST00000477739ENST00000482499ENST00000495428ENSG00000225548ENST00000414382ENST00000425195ENST00000455984ENSG00000229243ENST00000432163ENSG00000235493ENST00000356047ENST00000437506
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DZ_0001ENSDARG00000019428ENSDART00000008317ENSDARG00000042996ENSDART00000063129ENSDARG00000042997ENSDART00000063131CIL_0002DZ_0002ENSG00000163508ENST00000295743ENST00000449599ENST00000461503ENSG00000163512ENST00000295748ENST00000334100ENST00000420543ENST00000429369ENST00000462936ENST00000476174ENST00000479665ENST00000492044ENSG00000187118ENST00000334841ENST00000418849ENST00000423894ENST00000477739ENSG00000225548ENST00000414382ENST00000425195ENST00000455984ENSG00000229243ENST00000432163ENSG00000235493ENST00000356047
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019428 ENSDART00000008317 N/A N/A N/A 1.503±0.00 N/A N/A 0.104±0.02 0.047±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000042996 ENSDART00000063129 N/A N/A N/A 13.565±3.92 N/A N/A 52.653±24.25 13.965±2.62 1.427±0.00 N/A 12.948±0.00 N/A N/A N/A
ENSDARG00000042997 ENSDART00000063131 N/A N/A N/A 2.367±1.05 N/A N/A 1.821±1.38 0.972±0.03 0.417±0.00 N/A 1.563±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163508 ENST00000295743 0.038±0.00 0.674±0.00 0.108±0.00 0.023±0.00 0.032±0.00 N/A 0.027±0.00 N/A 0.068±0.00 1.454±0.00 N/A 0.079±0.00 0.126±0.07 0.261±0.06
ENST00000449599 N/A N/A N/A N/A 0.214±0.00 0.061±0.00 0.042±0.00 0.076±0.00 0.117±0.08 0.184±0.09 0.033±0.00 0.077±0.04 0.055±0.00 N/A
ENST00000461503 0.064±0.00 N/A N/A N/A N/A 0.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163512 ENST00000295748 7.143±0.00 6.129±0.00 1.109±0.00 3.009±1.11 5.501±2.25 5.104±2.60 2.578±1.34 4.777±3.25 2.667±0.04 4.102±2.00 1.118±0.93 3.851±1.51 2.989±0.19 4.290±0.00
ENST00000334100 N/A N/A N/A N/A N/A N/A N/A 3.680±0.00 N/A 5.083±0.00 N/A 12.379±0.00 6.193±0.00 18.896±0.00
ENST00000414162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.752±1.70 7.544±3.81 13.919±5.75
ENST00000429369 N/A N/A 5.498±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.241±0.00 40.705±0.00 82.267±0.00
ENST00000463512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476174 N/A N/A 7.164±0.00 N/A N/A N/A N/A N/A 14.934±0.00 11.691±0.00 N/A N/A N/A N/A
ENST00000479665 2.323±0.00 3.033±0.00 0.637±0.00 2.761±1.11 3.296±0.00 1.910±0.63 1.304±0.00 4.036±0.00 1.223±0.00 1.961±0.70 0.998±0.71 1.682±0.77 0.980±0.00 1.945±0.00
ENST00000488978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.755±0.00 6.081±0.00 10.567±0.00 N/A
ENSG00000187118 ENST00000334841 N/A N/A N/A N/A N/A N/A 12.551±0.00 N/A N/A N/A N/A N/A 10.569±0.00 18.513±0.00
ENST00000396610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418849 N/A N/A N/A N/A N/A N/A N/A 8.540±0.00 N/A N/A N/A N/A N/A N/A
ENST00000423894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.630±1.50 N/A
ENST00000466830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477739 N/A N/A N/A N/A 2.124±0.00 N/A N/A N/A N/A 1.715±0.00 N/A 1.271±0.00 N/A N/A
ENST00000482499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225548 ENST00000414382 N/A N/A 1.178±0.00 N/A 0.095±0.00 N/A N/A N/A N/A 0.449±0.00 N/A 0.379±0.00 N/A N/A
ENST00000425195 N/A N/A N/A N/A N/A N/A 0.114±0.00 0.168±0.00 N/A N/A N/A 0.082±0.00 0.086±0.02 0.560±0.00
ENST00000455984 N/A N/A N/A N/A 0.087±0.00 N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000229243 ENST00000432163 N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A 0.167±0.00
ENSG00000235493 ENST00000356047 0.329±0.00 0.564±0.00 0.299±0.00 0.633±0.08 0.577±0.10 0.864±0.70 0.677±0.38 0.470±0.26 0.586±0.44 0.670±0.49 0.135±0.10 0.455±0.38 0.133±0.05 0.472±0.04
ENST00000437506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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