C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480958 MPP3-004 ENSG00000161647 9606 - 17:43825041-43831633 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartKidneyLungOvaryPlacentaENST00000480958
Transcript ID Adipose Bladder Colon Heart Kidney Lung Ovary Placenta
ENST00000480958 1.061±0.00 0.107±0.00 0.228±0.00 2.018±0.00 0.656±0.00 2.608±0.00 0.570±0.00 0.223±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000996 CIL_000996_0001 VISTA 17:43262867-43863532
CIL_00090X CIL_00090X_0001 VISTA 17:43291368-43892559
CIL_000997 CIL_000997_0001 VISTA 17:43327654-43928719
CIL_0001CF CIL_0001CF_0001 CGP 17:43780435-43833170
CIL_00059S CIL_00059S_0001 CGP 17:43800799-43863629

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107167 Mpp3-008 protein_coding Mus_musculus 0 723
ENSMUST00000107168 Mpp3-004 protein_coding Mus_musculus 0 689
ENSMUST00000062801 Mpp3-001 protein_coding Mus_musculus 0 689
ENSMUST00000100400 Mpp3-005 protein_coding Mus_musculus 0 689
ENSMUST00000132094 Mpp3-002 processed_transcript Mus_musculus 0 496

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