C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: contactin 2 (axonal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481872 CNTN2-002 ENSG00000184144 9606 + 1:205058605-205074956 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverPlacentaTestisENST00000481872
Transcript ID Brain Breast Colon Liver Placenta Testis
ENST00000481872 1.947±0.00 0.092±0.00 0.042±0.00 0.035±0.01 0.053±0.02 3.060±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057C CIL_00057C_0002 CGP 1:204828651-205078499

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086521 Cntn2-001 protein_coding Mus_musculus 0 3029
ENSMUST00000186487 Cntn2-002 retained_intron Mus_musculus 0 3029
ENSMUST00000190601 Cntn2-003 retained_intron Mus_musculus 0 1940
ENSMUST00000188065 Cntn2-004 nonsense_mediated_decay Mus_musculus 0 1862
ENSMUST00000188143 Cntn2-008 retained_intron Mus_musculus 0 540

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