C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481983 ZSCAN23-002 ENSG00000187987 9606 - 6:28431930-28443480 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000481983
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000481983 0.054±0.00 0.093±0.00 0.456±0.00 0.202±0.08 0.251±0.06 0.286±0.24 0.248±0.00 0.020±0.00 0.170±0.15 0.034±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 0 207
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 0 207
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 1e-37 161
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 1e-37 161
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 1e-37 161
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 1e-37 161
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 6e-36 156
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 2e-31 141
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 2e-31 141
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 2e-31 141
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 2e-30 137
ENSMUST00000085664 Zfp433-201 protein_coding Mus_musculus 0.00000000007 73

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