C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: split hand/foot malformation (ectrodactyly) type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482389 SHFM1-010 ENSG00000127922 9606 - 7:96688769-96697372 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastLungOvaryENST00000482389
Transcript ID Adrenal Bladder Brain Breast Lung Ovary
ENST00000482389 2.780±0.00 0.772±0.00 0.939±0.00 1.137±0.00 2.110±0.00 1.608±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W8 CIL_0007W8_0001 VISTA 7:95945535-96548789
CIL_00097Z CIL_00097Z_0001 VISTA 7:96146093-96746679
CIL_000980 CIL_000980_0001 VISTA 7:96195606-96796103
CIL_000981 CIL_000981_0001 VISTA 7:96291763-96892262

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041111 Shfm1-001 protein_coding Mus_musculus 0 268

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