C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibronectin type III and SPRY domain containing 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484973 FSD1L-004 ENSG00000106701 9606 + 9:105448123-105546602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLungMuscleENST00000484973
Transcript ID Bladder Brain Breast Heart Lung Muscle
ENST00000484973 0.352±0.00 1.570±0.00 0.825±0.00 0.337±0.00 0.488±0.13 0.318±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033S CIL_00033S_0001 CGP 9:105244622-105552433
CIL_00033Y CIL_00033Y_0001 CGP 9:105447796-105641118

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132151 Fsd1l-001 protein_coding Mus_musculus 0 1975
ENSMUST00000163067 Fsd1l-004 protein_coding Mus_musculus 0 1956
ENSMUST00000180164 Fsd1l-201 protein_coding Mus_musculus 0 1936
ENSMUST00000159415 Fsd1l-005 protein_coding Mus_musculus 0 1214
ENSMUST00000129648 Fsd1l-003 nonsense_mediated_decay Mus_musculus 0 640
ENSMUST00000107643 Fsd1l-002 retained_intron Mus_musculus 0 449

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