C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: post-GPI attachment to proteins 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485602 PGAP2-012 ENSG00000148985 9606 + 11:3797941-3824862 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K0 CIL_0005K0_0001 CGP 11:3665587-3797792
CIL_0005K9 CIL_0005K9_0001 CGP 11:3671083-3826371
CIL_0005KW CIL_0005KW_0001 CGP 11:3797724-3840983

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129340 Pgap2-006 nonsense_mediated_decay Mus_musculus 0 403
ENSMUST00000140058 Pgap2-022 nonsense_mediated_decay Mus_musculus 0 383
ENSMUST00000142873 Pgap2-021 protein_coding Mus_musculus 0 244
ENSMUST00000138479 Pgap2-014 protein_coding Mus_musculus 0 243
ENSMUST00000133311 Pgap2-028 processed_transcript Mus_musculus 8e-38 161
ENSMUST00000119816 Pgap2-024 nonsense_mediated_decay Mus_musculus 8e-38 161
ENSMUST00000145352 Pgap2-023 nonsense_mediated_decay Mus_musculus 8e-38 161
ENSMUST00000153020 Pgap2-013 protein_coding Mus_musculus 8e-38 161
ENSMUST00000120119 Pgap2-007 protein_coding Mus_musculus 8e-38 161
ENSMUST00000033292 Pgap2-003 protein_coding Mus_musculus 8e-38 161
ENSMUST00000140631 Pgap2-030 protein_coding Mus_musculus 3e-37 159
ENSMUST00000120879 Pgap2-029 protein_coding Mus_musculus 4e-31 139
ENSMUST00000137303 Pgap2-027 protein_coding Mus_musculus 4e-31 139
ENSMUST00000134621 Pgap2-025 retained_intron Mus_musculus 4e-31 139
ENSMUST00000150891 Pgap2-005 processed_transcript Mus_musculus 4e-31 139
ENSMUST00000156529 Pgap2-002 protein_coding Mus_musculus 4e-31 139

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