C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486374 ARHGAP21-004 ENSG00000107863 9606 - 10:24583614-24621369 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonLiverLungENST00000486374
Transcript ID Adrenal Bladder Brain Colon Liver Lung
ENST00000486374 0.482±0.00 0.643±0.00 6.144±0.00 2.566±0.00 1.927±0.00 2.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002D1 CIL_0002D1_0001 CGP 10:23694746-24723668
CIL_00077X CIL_00077X_0002 CGP 10:24583609-24952604

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154230 Arhgap21-201 protein_coding Mus_musculus 0 2983
ENSMUST00000173194 Arhgap21-013 protein_coding Mus_musculus 0 2983
ENSMUST00000114594 Arhgap21-001 protein_coding Mus_musculus 0 2983
ENSMUST00000174584 Arhgap21-005 nonsense_mediated_decay Mus_musculus 0 2874
ENSMUST00000141298 Arhgap21-012 protein_coding Mus_musculus 0 2874
ENSMUST00000173784 Arhgap21-018 protein_coding Mus_musculus 0 939
ENSMUST00000174825 Arhgap21-014 processed_transcript Mus_musculus 0 649
ENSMUST00000127512 Arhgap21-008 retained_intron Mus_musculus 0 446
ENSMUST00000131542 Arhgap21-011 retained_intron Mus_musculus 0 375
ENSMUST00000136241 Arhgap21-009 processed_transcript Mus_musculus 0 368
ENSMUST00000154657 Arhgap21-007 retained_intron Mus_musculus 0 331

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