C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basonuclin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486514 BNC2-007 ENSG00000173068 9606 - 9:16552580-16870843 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PP CIL_0007PP_0001 UCNEbase 9:15728012-17487698
CIL_000148 CIL_000148_0001 CGP 9:16409503-17503923

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176612 Bnc2-004 protein_coding Mus_musculus 0 977
ENSMUST00000176346 Bnc2-015 nonsense_mediated_decay Mus_musculus 0 765
ENSMUST00000123276 Bnc2-003 retained_intron Mus_musculus 0 765
ENSMUST00000175800 Bnc2-005 protein_coding Mus_musculus 0 765
ENSMUST00000107198 Bnc2-007 protein_coding Mus_musculus 0 765
ENSMUST00000177256 Bnc2-018 processed_transcript Mus_musculus 0 745
ENSMUST00000176947 Bnc2-016 protein_coding Mus_musculus 0 449
ENSMUST00000102820 Bnc2-002 protein_coding Mus_musculus 0 420
ENSMUST00000176476 Bnc2-019 processed_transcript Mus_musculus 0 418
ENSMUST00000175969 Bnc2-017 protein_coding Mus_musculus 0 418
ENSMUST00000175757 Bnc2-022 processed_transcript Mus_musculus 0 418
ENSMUST00000176418 Bnc2-006 protein_coding Mus_musculus 0 418
ENSMUST00000176691 Bnc2-001 protein_coding Mus_musculus 0 418
ENSMUST00000176370 Bnc2-014 protein_coding Mus_musculus 0 339
ENSMUST00000177040 Bnc2-020 protein_coding Mus_musculus 0 289
ENSMUST00000175756 Bnc2-013 protein_coding Mus_musculus 0 265
ENSMUST00000176264 Bnc2-021 processed_transcript Mus_musculus 5e-34 148

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