C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TNFRSF1A-associated via death domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486556 TRADD-002 ENSG00000102871 9606 - 16:67154199-67156249 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartKidneyLungMuscleOvaryPlacentaTestisENST00000486556
Transcript ID Adipose Adrenal Bladder Brain Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000486556 2.463±0.00 4.041±0.00 0.674±0.00 1.892±0.00 1.886±1.40 2.900±0.00 8.594±0.00 1.575±0.00 8.842±6.05 9.013±0.00 5.688±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0001 VISTA 16:66603173-67205657
CIL_0005T5 CIL_0005T5_0001 CGP 16:67148105-67160298
CIL_0005T4 CIL_0005T4_0001 CGP 16:67154180-67164570

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0006915 TAS apoptotic process
GO:0006919 TAS activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007165 TAS:IEA signal transduction
GO:0008625 TAS extrinsic apoptotic signaling pathway via death domain receptors
GO:0019900 IPI kinase binding
GO:0031264 TAS death-inducing signaling complex
GO:0033209 TAS tumor necrosis factor-mediated signaling pathway
GO:0042802 IPI identical protein binding
GO:0043065 TAS positive regulation of apoptotic process
GO:0043123 IEP:IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043235 IDA receptor complex
GO:0051092 TAS positive regulation of NF-kappaB transcription factor activity
GO:0060090 IPI binding, bridging
GO:0070513 IPI death domain binding
GO:0097190 TAS apoptotic signaling pathway
GO:0097191 IMP extrinsic apoptotic signaling pathway
GO:2001239 TAS regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

No Homologs available.

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