C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sideroflexin 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000489434  |
SFXN3-005 |
ENSG00000107819 |
9606 | + |
10:101034692-101037167  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008BD | CIL_0008BD_0001 | VISTA | 10:100486833-101088338 |
| CIL_0007U1 | CIL_0007U1_0001 | VISTA | 10:100491715-101092615 |
| CIL_000940 | CIL_000940_0001 | VISTA | 10:100919065-101519843 |
| CIL_0005NG | CIL_0005NG_0001 | CGP | 10:101007683-101041244 |
| CIL_0005NF | CIL_0005NF_0001 | CGP | 10:101031234-101068131 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006811 | IEA | ion transport |
| GO:0008324 | IEA | cation transmembrane transporter activity |
| GO:0015075 | IEA | ion transmembrane transporter activity |
| GO:0016020 | IEA | membrane |
| GO:0055085 | IEA | transmembrane transport |
| GO:0098655 | IEA | cation transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000084493
|
Sfxn3-202 | protein_coding | Mus_musculus | 0 | 604 |
|
ENSMUST00000062213
|
Sfxn3-201 | protein_coding | Mus_musculus | 0 | 604 |
|
ENSMUST00000111954
|
Sfxn3-203 | protein_coding | Mus_musculus | 0 | 405 |
|
ENSDART00000023654
|
sfxn1-201 | protein_coding | Danio_rerio | 0 | 237 |
|
ENSDART00000133811
|
sfxn1-001 | protein_coding | Danio_rerio | 0 | 237 |
