C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucan (1,4-alpha-), branching enzyme 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489715 GBE1-002 ENSG00000114480 9606 - 3:81489933-81743629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000489715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000489715 31.954±0.00 4.363±0.00 1.175±0.00 1.649±0.00 15.546±9.29 6.288±3.38 6.028±0.58 8.730±1.78 5.288±0.07 6.755±0.00 9.991±7.61 2.256±0.72 3.134±1.00 1.680±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059Y CIL_00059Y_0002 CGP 3:81489699-86074429

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0003844 IEA 1,4-alpha-glucan branching enzyme activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 IEA carbohydrate metabolic process
GO:0005978 IEA glycogen biosynthetic process
GO:0043169 IEA cation binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163832 Gbe1-001 protein_coding Mus_musculus 0 2283
ENSMUST00000023393 Gbe1-201 protein_coding Mus_musculus 0 2278
ENSMUST00000170464 Gbe1-202 protein_coding Mus_musculus 0 2270
ENSMUST00000171132 Gbe1-203 protein_coding Mus_musculus 0 2052
ENSMUST00000164300 Gbe1-003 retained_intron Mus_musculus 0 2052
ENSMUST00000099628 Gbe1-004 retained_intron Mus_musculus 0 215

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