C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: death effector domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490843 DEDD-006 ENSG00000158796 9606 - 1:161121787-161132667 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000490843
Transcript ID Breast
ENST00000490843 9.974±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CT CIL_0000CT_0002 CGP 1:161100556-161125445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 ISS DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0042981 IEA regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111300 Dedd-001 protein_coding Mus_musculus 0 1940
ENSMUST00000111299 Dedd-003 protein_coding Mus_musculus 0 1851
ENSMUST00000097467 Dedd-004 protein_coding Mus_musculus 0 1768
ENSMUST00000064950 Dedd-002 protein_coding Mus_musculus 0 1768
ENSMUST00000129116 Dedd-007 protein_coding Mus_musculus 0 1088
ENSMUST00000142063 Dedd-006 protein_coding Mus_musculus 0 869
ENSMUST00000111289 Nit1-001 protein_coding Mus_musculus 0 856
ENSMUST00000127830 Dedd-010 protein_coding Mus_musculus 0 749
ENSMUST00000131653 Dedd-005 retained_intron Mus_musculus 0 693
ENSMUST00000146428 Nit1-004 retained_intron Mus_musculus 0 508
ENSMUST00000111296 Nit1-003 protein_coding Mus_musculus 0 508
ENSDART00000128377 dedd-201 protein_coding Danio_rerio 2.94273e-44 183
ENSDART00000042867 dedd-001 protein_coding Danio_rerio 2.94273e-44 183
ENSMUST00000141357 Nit1-005 retained_intron Mus_musculus 7e-36 156

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