C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | thioredoxin reductase 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000491939  |
TXNRD2-005 |
ENSG00000184470 |
9606 | - |
22:19894260-19933526  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008BW | CIL_0008BW_0001 | VISTA | 22:19453681-20054184 |
| CIL_00099J | CIL_00099J_0001 | VISTA | 22:19461833-20062532 |
| CIL_00095F | CIL_00095F_0001 | VISTA | 22:19497462-20100487 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0008033 | IEA | tRNA processing |
| GO:0016491 | IEA | oxidoreductase activity |
| GO:0050660 | IEA | flavin adenine dinucleotide binding |
| GO:0055114 | IEA | oxidation-reduction process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000185160
|
AC133487.1-202 | protein_coding | Mus_musculus | 0 | 846 |
|
ENSMUST00000115604
|
Txnrd2-002 | protein_coding | Mus_musculus | 0 | 846 |
|
ENSMUST00000115606
|
Txnrd2-001 | protein_coding | Mus_musculus | 0 | 846 |
|
ENSMUST00000115605
|
Txnrd2-011 | nonsense_mediated_decay | Mus_musculus | 0 | 846 |
|
ENSMUST00000184600
|
AC133487.1-201 | protein_coding | Mus_musculus | 0 | 791 |
|
ENSMUST00000178093
|
Txnrd2-202 | protein_coding | Mus_musculus | 0 | 791 |
|
ENSMUST00000177856
|
Txnrd2-201 | protein_coding | Mus_musculus | 0 | 791 |
|
ENSMUST00000144233
|
Txnrd2-005 | processed_transcript | Mus_musculus | 0 | 514 |
|
ENSMUST00000138310
|
Txnrd2-006 | processed_transcript | Mus_musculus | 5e-28 | 130 |
|
ENSMUST00000128766
|
Sept6-004 | retained_intron | Mus_musculus | 0.000003 | 58 |
