C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin reductase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115606 Txnrd2-001 ENSMUSG00000075704 10090 + 16:18426417-18479073 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000115606
Transcript ID Adrenal Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000115606 58.383±5.95 8.640±0.00 17.310±0.00 17.738±2.45 50.183±16.78 8.987±1.14 12.281±3.55 12.137±0.89 2.507±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095F CIL_00095F_0002 VISTA 16:18254168-18857637
CIL_00099J CIL_00099J_0002 VISTA 16:18285741-18886132
CIL_0008BW CIL_0008BW_0002 VISTA 16:18293232-18893684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000305 TAS response to oxygen radical
GO:0004791 ISS thioredoxin-disulfide reductase activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0007507 IMP heart development
GO:0030097 IMP hemopoiesis
GO:0045454 IEA cell redox homeostasis
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0050661 IEA NADP binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334363 TXNRD2-201 protein_coding Homo_sapiens 0 872
ENST00000400518 TXNRD2-004 protein_coding Homo_sapiens 0 1432
ENST00000400519 TXNRD2-012 protein_coding Homo_sapiens 0 1461
ENST00000400521 TXNRD2-003 protein_coding Homo_sapiens 0 1459
ENST00000400525 TXNRD2-006 protein_coding Homo_sapiens 0 1371
ENST00000471835 TXNRD2-014 retained_intron Homo_sapiens 0 226
ENST00000474308 TXNRD2-007 protein_coding Homo_sapiens 0 1188
ENST00000484672 TXNRD2-015 processed_transcript Homo_sapiens 0 307
ENST00000491939 TXNRD2-005 protein_coding Homo_sapiens 0 846
ENST00000494454 TXNRD2-008 retained_intron Homo_sapiens 0 1094
ENST00000496729 TXNRD2-013 retained_intron Homo_sapiens 0 508
ENST00000542719 TXNRD2-020 protein_coding Homo_sapiens 0 1432

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