C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: aminolevulinate, delta-, synthase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493402 ALAS1-007 ENSG00000023330 9606 + 3:52206632-52214225 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverENST00000493402
Transcript ID Adrenal Liver
ENST00000493402 7.657±0.00 52.560±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087C CIL_00087C_0001 VISTA 3:51705330-52307529
CIL_0008NT CIL_0008NT_0001 VISTA 3:51738719-52342071
CIL_0007WP CIL_0007WP_0001 VISTA 3:52127966-52731115

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009058 IEA biosynthetic process
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134053 Alas1-004 processed_transcript Mus_musculus 0 671
ENSMUST00000074082 Alas1-002 protein_coding Mus_musculus 0 671
ENSMUST00000141118 Alas1-001 protein_coding Mus_musculus 0 671
ENSMUST00000112524 Alas1-003 protein_coding Mus_musculus 0 671
ENSMUST00000143125 Alas1-007 nonsense_mediated_decay Mus_musculus 0 451
ENSMUST00000123115 Alas1-008 retained_intron Mus_musculus 0 449
ENSMUST00000123601 Alas1-006 retained_intron Mus_musculus 9.99995e-41 171

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