C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF) 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496710 ARHGEF26-003 ENSG00000114790 9606 + 3:154121416-154256548 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartMusclePlacentaENST00000496710
Transcript ID Bladder Brain Heart Muscle Placenta
ENST00000496710 0.203±0.00 1.110±0.00 0.304±0.00 0.243±0.03 0.325±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066Q CIL_00066Q_0001 CGP 3:154121003-154324497

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079300 Arhgef26-001 protein_coding Mus_musculus 0 2252
ENSMUST00000163008 Arhgef26-002 processed_transcript Mus_musculus 0 977
ENSMUST00000161057 Arhgef26-005 protein_coding Mus_musculus 0 924
ENSMUST00000161493 Arhgef26-004 retained_intron Mus_musculus 0 497
ENSMUST00000159746 Arhgef26-003 processed_transcript Mus_musculus 0 490

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